study folder template
Annotations for study folders [Download]
| Attribute | Description | Required | columnType | DependsOn | Source | Parent | Valid Values |
|---|---|---|---|---|---|---|---|
| isModelSystem | Boolean flag indicating whether or not a file has data from a model system | True | BOOLEAN | Sage Bionetworks | ManifestColumn | True, False, Not assigned | |
| dataTypeAll | True | STRING | Sage Bionetworks | ManifestColumn | clinical,drugScreen,electrophysiology,epigenetics,geneExpression,genomeAssembly,genomicVariants,imaging,lipidomics,metabolomics,metagenomics,Not applicable,Not collected,Not specified,Other,phenotype,proteomics,Unknown,wearableData | ||
| program | True | STRING | Sage Bionetworks | ManifestColumn | ELITE,AD | ||
| projectShortName | True | STRING | Sage Bionetworks | ManifestColumn | LC,ILO,LLFS,LG, Not assigned | ||
| specimenType | Type of biological material comprising the Specimen | True | STRING | ManifestColumn | blood,Cerebrospinal Fluid (CSF),Not applicable,Not collected,Not specified,organoid,plasma,saliva,serum,sputum,stool,swabs,tissue,Unknown,urine | ||
| studyKey | The short acronym for a study name in a URL-friendly format (ex. LLFS_Metabolomics OR ELPSCRNA) | True | STRING | Sage Bionetworks | ManifestColumn | ||
| Component | False | STRING | |||||
| accessReqs | False | STRING | |||||
| ackContext | False | STRING | |||||
| acknowledgment | False | STRING | |||||
| grantNumber | Grant number including activity code institute code and serial number (e.g. U01MH103392) | True | STRING | Sage Bionetworks | ManifestColumn | U19AG063893,U24AG051129,U19AG023122,UH2AG064706,UH3AG064706,UH2AG064704,UH3AG064704,R01AG061844, Not assigned | |
| isFeatured | False | BOOLEAN | |||||
| isReleased | False | BOOLEAN | |||||
| metadataType | For files of dataSubtype: metadata, a description of the type of metadata in the file | False | STRING | Sage Bionetworks | ManifestColumn | individual,biospecimen,assay,supplementary files,Not Assigned | |
| methods | False | STRING | |||||
| newsRelease | False | STRING | |||||
| projectFullName | False | STRING | |||||
| relatedStudies | False | STRING | |||||
| studyAbstract | False | STRING | |||||
| studyDescription | False | STRING | |||||
| studyFocus | False | STRING | |||||
| studyMetadata | False | STRING | |||||
| studyName | False | STRING | |||||
| studyType | False | STRING | |||||
| studyWiki | False | STRING | |||||
| species | The name of a species (typically a taxonomic group) of organism. | True | STRING | Sage Bionetworks | ManifestColumn | Cross-Species Avian,Cross-Species Mammalian,Human,Mouse |